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A. Alberdi

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Open access Sep 2026

Integrative holo-omic data analysis predicts interactions across the host-microbiome axis

It is shown that a computational method designed for multi-omic analysis in eukaryotes can be leveraged to integrate and analyze five layers of holo-omic data from porcine hosts and their gut microbiomes, and predicts new leads for understanding host-microbiome symbiosis.

J. Merkesvik, J. Langa, C. Pietroni et al. · 0 citations
Review Open access Jul 2026

LMDmapper: an open-source desktop tool for spatial mapping of laser microdissection samples

Laser microdissection (LMD) enables researchers to isolate targeted microsamples from microscopy slide specimens for downstream molecular analyses. While traditionally employed for isolating eukaryotic cells from complex tissues, LMD is starting to be used for micro-scale spatial microbiome analyses, which require the...

A. Alberdi, Jaime Ramirez, N. Gaun et al. · 0 citations

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