Author

Adrián Díaz

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Open access Aug 2026

Scop3P-Toolkit: executable structure-aware workflows linking PTMs, peptides, and mutations to protein function

Scop3P-Toolkit is an open-source executable analytical environment for interactive analysis of PTMs, mutations, and proteomics-derived peptides in their structural context, providing transparent, accessible, and reproducible workflows for both computational and experimental researchers.

Adrián Díaz, Natalia Tichshenko, Boris Depoortere et al. · bioRxiv · 0 citations

Open access Jul 2026

Scop3P in 2026: an expanded proteomics-informed resource contextualizing phosphorylation sites through sequence, structure, mutation, and experimental provenance

A major update of Scop3P, a proteomics-informed knowledgebase that contextualizes human phosphorylation sites within integrated sequence, structural, biophysical, evolutionary, and mutational frameworks, and provides a scalable and provenance-aware resource for phosphosite interpretation, hypothesis generation, and dat...

P. Ramasamy, Natalia Tichshenko, Adrián Díaz et al. · bioRxiv · 0 citations