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Anshu Gupta

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Open access Aug 2026

ROADIES-XP: GPU Acceleration and Phylogenetic Update Improve Scalability of Species Tree Inference from Raw Genomic Assemblies

Most large-scale whole-genome sequencing projects release assemblies incrementally in phases. However, existing phylogenomic workflows typically assume a static set of genomic sequences, thus requiring a full de novo species tree reconstruction whenever new genomes need to be incorporated into the analysis, which is bo...

Anshu Gupta, Wen-Chieh Lo, Siavash Mirarab et al. · 0 citations

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