Effective mitigation of the COVID-19 pandemic depended on timely and reliable indicators generated by robust surveillance systems. While monitoring of disease burden and transmission relied largely on established surveillance tools, antigen rapid diagnostic tests (Ag-RDTs) were primarily used for individual diagnostics...
David Wuttke, Esther-Maria Antão, Simon Witzke et al.· npj Digital Public Health· 0 citations
EmmaEmb is introduced, a quantitative, model-agnostic framework for geometric correction, direct analysis, and comparison of embedding spaces that encompasses local and global analysis methods to quantify data distribution within an embedding space and enable comparisons of representations across spaces in relation to...
Pia Francesca Rissom, Vít Škrhák, Paulo Yanez Sarmiento et al.· Patterns· 0 citations
It is shown that PLM embeddings encode patterns correlated with biochemical properties and quantify their contribution to predicting protein fitness, and this technique is readily transferable to problem settings beyond protein fitness prediction.
Paulo Yanez Sarmiento, Pia Francesca Rissom, Manuel Pfeuffer et al.· 0 citations
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