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Open access Oct 2026

EXCON: a scalable, reproducible Nextflow pipeline for CAFE-based gene EXpansion and CONtraction analysis

Gene family expansion and contraction analysis is a commonly used approach in evolutionary comparative genomics to identify lineage-specific evolutionary pressures on gene copy/family number. CAFE is one of the most popular tools to measure changes in gene family size, but requires a high level of bioinformatics expert...

Christopher D. R. Wyatt, Fernando Duarte, Alexandra Cerqueira de Araujo et al. · 0 citations

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