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Author

Caner Bağcı

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Open access Sep 2026

BGC Atlas v2: biosynthetic gene clusters with taxonomic and environmental context at scale

Genomic and metagenomic studies have revealed that microbes have the capacity to produce an enormous diversity of secondary metabolites. These compounds play important roles in microbial interactions and are also a major source of medicines and other useful natural products, yet only a small fraction of this biosynthet...

Caner Bağcı, Alec Talamas-Tanner, N. Ziemert · 0 citations
Open access Jul 2026

metaSMASH: Scalable Biosynthetic Gene Cluster Detection for Large Metagenomic Assemblies

antiSMASH is widely used for biosynthetic gene cluster (BGC) detection and annotation, but its standard workflow is poorly suited to large metagenomic assemblies, where massive contig counts create severe runtime bottlenecks and complicate downstream result exploration. We present metaSMASH, a re-engineered fork of ant...

Caner Bağcı, Kai Blin, N. Ziemert · 1 citation · ⚡1

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