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Open access Sep 2026

PURE: An interpretable framework for prioritizing candidate regulators of differential gene expression in plants.

While transcriptomic profiling has become routine, identifying the TFs underlying these expression patterns remains a major challenge, particularly for crops and non-model species lacking efficient transformation systems. To connect expression correlations with candidate regulatory mechanisms, we developed PURE (Plant...

Chuan-Shun Li, Le-Yi Yang, Kan-De Lin et al. · 0 citations
Open access Aug 2026

Identification of Cell Wall and Carbon Metabolism Associated Changes in Autotetraploid Grapevine Through Phenotypic, Transcriptomic and Metabolomic Analyses

Polyploidization can generate morphological and physiological variation in plants, but the molecular basis underlying leaf trait changes after genome doubling in grapevine remains insufficiently understood. This study aimed to characterize phenotypic, physiological, transcriptomic, and metabolomic differences between d...

Yuanxu Teng, Lipeng Zhang, Yue Song et al. · 0 citations

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