Recent advances in automatic speech recognition (ASR) have explored different sequence models, including Conformer-based models and newer state space models such as Mamba. Although prior work has evaluated these architectures in multiple languages, their effectiveness in African languages remains underexplored. In this work, we evaluate Mamba for ASR on seven South African languages. In monolingual experiments, each model is trained on 50 hours of speech per language, and we compare Mamba to a Conformer baseline of similar parameter scale. Mamba achieves similar recognition accuracy to Conformer while using fewer computational resources and training faster. We further evaluate generalization in this setting and find that both models struggle to generalize to speech that is much longer than what they were trained on. We then study multilingual ASR using Mamba models, where the baseline is pooling all languages together. On top of this, we tested three extensions: training with language-family information by adding both language and language-family embeddings as biases to the downsampled acoustic representations, and multitask learning with a CTC ASR objective and a language identification (LID) head. We find that multilingual training consistently improves performance over monolingual training. However, adding explicit language information does not improve in-domain performance but does improve cross-corpus robustness. We conducted ablation studies in low-resource multilingual settings using 5-hour and 10-hour per-language training data, where we observed gains from using language embeddings and further demonstrated that removing or altering them hurt model performance. Lastly, we analysed these embeddings and find that they do not capture linguistic similarity in a typological sense, but instead act as task-specific control vectors.
Jesujoba Oluwadara Alabi, Julian Herreilers, Badr M. Abdullah et al.· 0 citations
Protein language models (PLMs) have transferred the latest advances from natural language processing to computational biology. These models, trained on large corpora of protein sequence data, are widely used to translate amino acid sequences into latent-space embeddings, ready for use in diverse downstream tasks (DTs). By a common consensus, embeddings from the model's last layer are used, and the model's internal behavior remains poorly understood. We analyzed 13 PLMs across 15 DTs from 11 datasets to investigate the informativeness of embeddings created in intermediate PLM layers. We trained probe models on embeddings from each layer, compared their performance, and computed characteristics of the latent spaces they span to estimate the information they contain, and found that the last layers of PLMs rarely contained embeddings that led to the best results on downstream tasks. Furthermore, we identified a connection between DTs and the distribution across PLMs'layers of the relevant information to predict that task. For example, similarity between the pre-training objective and the objective of predicting properties of individual residues leads to a steady increase in understanding of such tasks across the layers of PLMs. On the other hand, for whole-protein tasks, we observe that the dataset, rather than the task itself, defines PLMs'ability to perform well on a DT. Embeddings from shallow layers of PLMs perform better for datasets that contain deep mutational scan (DMS) data, while datasets containing diverse natural proteins find most useful embeddings in the models'deeper layers. Additionally, we discover that the performance of PLMs drops significantly when tasks are introduced for artificial proteins.
R. Joeres, Ilya S. Senatorov, A. Kolchina et al.· 0 citations