Author

Fabrizio Musacchio

2 papers indexed here

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Open access Aug 2026

ZenReg: A modular Python platform for fast and memory-efficient N-dimensional microscopy image registration

ZenReg, an open-source Python platform that formulates common 2D+t, 3D, and 3D+t microscopy registration tasks as modular, geometry-preserving alignment problems, turns motion correction into an inspectable, memory-aware, and FAIR-oriented component of reproducible bioimage analysis.

F. Musacchio, M. Fuhrmann · bioRxiv · 1 citation

Open access Jul 2026

CellColoc: A modular, open-source workflow for cell colocalization, segmentation, and feature extraction in microscopy images

By separating reusable analysis logic from project-specific configuration, CellColoc offers an extensible foundation for community-driven microscopy workflows that need transparent per-cell overlap classification, morphology readouts, and reusable batch analysis.

F. Musacchio, Henrike Antony, Arush Baijal et al. · bioRxiv · 1 citation