Author

Hu Liu

3 papers indexed here

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#software testing Open access Sep 2026

PooledScreenAudit: auditing control-associated prediction in pooled variant-effect screens

PooledScreenAudit 0.4.0 is an installable Python implementation for auditing control-associated prediction in pooled variant-effect screens. Starting from prepared variant–condition and residue-level matrices, it provides matched prediction with and without control features, rank-aware representation geometry, size-mat...

niu niu, Wei Fang, Wenjuan Li et al. · Zenodo (CERN European Organi... · 0 citations

#software testing Open access Sep 2026

Complete analysis companion for outcome-blind identifiability diagnostics in pooled kinase inhibitor screens

Version 1.2.0 preserves the unchanged v1.1.0 analysis companion and adds paper_a_analysis_amendment_v1_2_0.zip. Read the amendment MANUSCRIPT_VALUE_MAP.md for the current results. The amendment supplies Source Data 1–3, figure-source tables, rank-aware geometry, direction-level predictive attribution, source-defined se...

Niu Niu, Wei Fang, wenjuan li et al. · Zenodo (CERN European Organi... · 0 citations

#software testing Open access Aug 2026

PooledScreenID: outcome-blind shortcut and separability diagnostics for pooled variant-effect screens

PooledScreenID is an installable, research-use Python package that separately reports material cold-start gain, outcome-blind control association, representation separability and external calibration before generating a claim resolution. Version 0.1.2 includes a minimal Python API, command-line interface, machine-reada...

niu niu, Wei Fang, wenjuan li et al. · Zenodo (CERN European Organi... · 0 citations