I. Rodríguez-Barraquer

MASCOT-DS improves transmission dynamics inference by integrating multiple epidemiological data streams with phylodynamic inference

Tracking how an infectious disease spreads in time and space relies on several distinct sources of surveillance data, reported case counts, viral concentrations in wastewater, seroprevalence surveys, and pathogen genomic sequences, each of which is imperfect and captures only part of the underlying transmission process...

Surrogate methods for parameter inference in transmission dynamic models