Ignatius Jeppe Menzies

hpci improves reproducibility of computational biology research by integrating Continuous Integration with High Performance Computing clusters.

MOTIVATION The reproducibility crisis in bioinformatics and computational biology can be mitigated by using Continuous Integration (CI), a proven software engineering practice, to automate the testing of analysis pipelines and models. However, the adoption of CI in bioinformatics is limited as existing solutions are ty...