Abstract Fungi play pivotal roles in terrestrial ecosystems as decomposers, pathogens and endophytes, yet their significance in marine environments is often understudied. Seagrasses, as globally distributed marine flowering plants, have critical ecological functions but knowledge about their associated fungal communiti...
C. Ettinger, Jonathan A. Eisen, J. Stajich· Microbial Genomics· 0 citations
This work introduces orthoSynAssign, a user-friendly, high-performance rewrite of the orthogroup refinement tool OrthoRefine, combining an intuitive Python interface with a core computing engine written in Rust, which provides a reliable and scalable framework for high-throughput phylogenomic workflows.
Cheng-Hung Tsai, Carolina G. Piña Páez, J. Stajich· bioRxiv· 0 citations
Both “viral fossils” and active infection by giant viruses in fungi, particularly in the zoosporic phyla Blastocladiomycota and Chytridiomycota are reported, suggesting that viral activation may be constrained to certain life stages of the host.
J. Myers, F. Schulz, S. Rahimlou et al.· PLoS Biology· 2 citations
Abstract As Earth’s principal reservoir of organic carbon and microbial biomass, the deep subsurface hosts microorganisms capable of mobilizing this once-sequestered carbon. Contrary to standard assumptions of eukaryotic scarcity, this study documents abundant fungal communities, ranging from 4.2 × 103 to 6.8 × 103 fun...
Quinn S Moon, Elliott P Barnhart, M. Varonka et al.· The ISME Journal· 0 citations
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