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Open access Sep 2026

Bridging the accuracy-speed divide in reactive molecular dynamics with QuantaMind MD

Simulating chemical reactivity remains a central challenge in molecular dynamics, historically constrained by the trade-off between ab initio accuracy and classical efficiency. We present QuantaMind, a machine learning force field (MLFF) framework that attains density functional theory (DFT)–level accuracy, enabling fully reactive simulations of complex molecular systems. QuantaMind achieves exceptional numerical stability over tens-of-nanosecond trajectories, maintaining accuracy throughout long-time reactive dynamics. It reproduces spontaneous bond formation and cleavage in key chemical processes—including proton transfer, acid-base neutralization, and phosphate buffering—and captures biologically essential phenomena such as histidine titration under constant pH. As a demonstration of the framework’s applicability to enzyme catalysis, QuantaMind recapitulates the complete catalytic cycle of the PETase-catalyzed hydrolysis reaction. By uniting quantum-level accuracy with computational efficiency comparable to state-of-the-art MLFFs, QuantaMind establishes a paradigm for long-timescale, fully reactive molecular simulation, opening avenues for rational catalyst design, reactive materials discovery, and predictive modeling of biochemical function.

Song Xia, De-Qiang Zhang, Xue-Dong Shang et al. · 0 citations
Book Open access Aug 2026

The Forgetting-Learning Trade-off: Making Reinforcement Learning Work for Protein Language Models

Diagnostics reveal that RL on PLMs is governed by two reward properties: verifiability, whether the reward is a fixed environment or a learned surrogate vulnerable to distribution shift, and coverage, the fraction of sequence space giving an informative gradient.

Hanqun Cao, Hongrui Zhang, Junde Xu et al. · 0 citations

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