A first-in-class strategy targeting the RNA-binding protein NONO using TF-Scan, a mass spectrometry–based functional proteomics platform that quantifies chromatin-associated protein networks in live cells, establishes NONO as a tractable target in mCRPC and introduces RNA molecular gluing as a novel modality to suppres...
Brian McEllin, D. Canzani, Lindsay K. Pino et al.· Clinical Cancer Research· 0 citations
This manuscript automates the integration of biological network databases with MSstatsBioNet, a Bioconductor package that integrates MSstats, a family of open-source packages for detecting differentially abundant proteins, and INDRA, a system that extracts biomolecular networks from biomedical literature using text min...
Anthony Wu, Devon Kohler, Pruthvi Prakash Navada et al.· bioRxiv· 0 citations
Ptarmigan-1 is presented, a contrastive model that co-embeds the residues of a protein with candidate small molecules in a shared latent space, from sequence and two-dimensional chemistry alone, and without ever constructing a pose.
W. Fondrie, D. Canzani, L. Tatka et al.· bioRxiv· 1 citation
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