Characterization of eukaryotic communities in small ruminant bile shows substantial extra-intestinal location of Cryptosporidium parvum.
Next-generation sequencing has expanded the study of microbial communities, yet the eukaryotic fraction of host-associated microbiomes remains poorly characterized, particularly in non-intestinal matrices. This study aimed to assess eukaryotic community diversity in bile from small ruminants. A total of 400 bile sample...