Author

Mark J. P. Chaisson

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Open access Sep 2026

Isocall enables scalable transcript identification from long-read RNA-sequencing data

Isocall, a scalable and deterministic computational method for jointly calling transcripts from multiple PacBio long-read RNA sequencing samples, converts aligned full-length non-concatemer reads into compact per-sample transcript profiles, merges these profiles across samples, and jointly identifies known and novel tr...

E. Dolzhenko, Megan D. Schertzer, Ryan Gossart et al. · bioRxiv · 1 citation

Open access Jul 2026

Pangenome-based human genome analysis improves trait association and genomic prediction

A graph-based method for associating sequence variation with traits using short-read genome sequencing data, and shows that it captures complex forms of genetic variation missed by other methods, suggest that integration of pangenomic methods into human genetic studies will improve trait association and genomic predict...

Shuangjia Lu, Wen-Wei Liao, Marianne K. DeGorter et al. · bioRxiv · 0 citations