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Mohammadreza Pourmirzaei

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#machine learning Preprint Oct 2026

Learning Latent Protein Languages for Autoregressive Generation

Autoregressive transformers remain comparatively weak for protein sequence and structure generation. We study the role of target representation: amino acid tokens encode residue identities without explicit contextual semantics, while backbone coordinates require a discrete representation in our framework. We introduce...

Mahdi Pourmirzaei, Farzaneh Esmaili, Amir Ziashahabi et al. · 0 citations

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