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Author

N. Bokulich

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Open access Sep 2026

MOSHPIT: Accessible, reproducible metagenome data science on the QIIME 2 framework.

Metagenome sequencing has revolutionized functional microbiome analysis across diverse ecosystems but is fraught with technical hurdles. We introduce MOSHPIT (MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking; https://moshpit.qiime2.org)-software built on the QIIME 2/rachis framework (Q2F) that i...

M. Ziemski, Liz Gehret, Anthony Simard et al. · 0 citations
Open access Aug 2026

Decoding the microbiota of borş: multifunctional potential of a traditional Romanian beverage fermentation

Overall, Romanian borş harbored a lactic acid bacteria-dominated core microbiome with a significant functional diversity, underscored its potential as a rich source of functional and technologically important strains for application in starter and protective culture development.

S. Grosu-Tudor, Annina R. Meyer, Iulia-Roxana Angelescu et al. · 0 citations

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