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Author

Nicola Bordin

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Open access Sep 2026

ContrasTED: contrastive domain embeddings for scalable remote homology classification

Protein structure prediction has expanded structural databases to hundreds of millions of domains. Classifying these domains into homologous superfamilies reveals evolutionary and functional relationships that can persist despite low sequence similarity. As the size of structural databases continues to grow, homology c...

David Miller, Nicola Bordin, Janusan Jeyananthan et al. · 0 citations
Open access Aug 2026

Structural plasticity drives convergent evolution and functional diversification of GNAT polyamine acetyltransferases.

A characterization of a large subset of PAAT enzymes, including their likely oligomeric states, functional site properties, and experimental functions is presented, including their likely oligomeric states, functional site properties, and experimental functions.

J. Roca-Martínez, Hazel N. Leiva Martel, Jialin Yin et al. · 0 citations

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