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O. Shchepin

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Open access Sep 2026

Short-read genome skimming enables molecular barcoding of old myxomycete collections

Abstract This study evaluates the effectiveness of Illumina-based genome skimming for barcoding myxomycete herbarium collections ranging from 29 to 91 years in age. We successfully retrieved partial sequences of the standard marker gene (nucSSU) in all cases, as well as additional markers (mtSSU, EF1a, and COI) for cer...

D. Leontyev, M. Schnittler, O. Shchepin · 0 citations
Open access Aug 2026

A multilocus phylogeny and updated classification of the Columellomycetidae (Myxomycetes, Amoebozoa) based on low-pass genome sequencing data

The plasmodial slime molds (Amoebozoa, class Myxomycetes) remain one of the few major eukaryotic groups lacking a classification based on robust multigene phylogenies. Extreme sequence divergence and the scarcity of universal primers have thus far impeded broad taxon sampling and the construction of deeply resolved phy...

O. Shchepin, I. Prikhodko, V. Gmoshinskiy et al. · 0 citations

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