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Author

Olga Vitek

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Open access Oct 2026

mzQC: a versatile way to communicate quality information for biological mass spectrometry

Reliable quality control (QC) is essential for reproducible biological mass spectrometry, yet QC information is still typically stored in tool-specific, poorly interoperable formats that hinder comparison, reuse, and transparent reporting. We present mzQC, a community-developed standard from the HUPO Proteomics Standar...

Chris Bielow, Mathias Walzer, Nils Hoffmann et al. · 0 citations
Open access Jul 2026

MSstatsBioNet: Integrating Statistical Analyses with Prior Knowledge Biomolecular Networks for Quantitative Proteomics and Phosphoproteomics

This manuscript automates the integration of biological network databases with MSstatsBioNet, a Bioconductor package that integrates MSstats, a family of open-source packages for detecting differentially abundant proteins, and INDRA, a system that extracts biomolecular networks from biomedical literature using text min...

Anthony Wu, Devon Kohler, Pruthvi Prakash Navada et al. · 0 citations

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