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Author

S. Mangul

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Open access Sep 2026

Large-scale benchmarking of prokaryotic annotation tools across thousands of species

This study presents the first large-scale investigation of four prominent open-source annotation tools (Prokka, Bakta, EggNOG-mapper, and PGAP) across 156,033 diverse genomes, highlighting tool-specific strengths crucial for selecting optimal solutions based on genome quality, taxonomy, and origin.

Mateusz Jundzill, Martin Hölzer, S. Mangul et al. · 0 citations
Open access Aug 2026

Eleven quick tips for Biomedical Federated Learning

Ten tips for successfully and sustainably implementing Federated learning for Biomedical applications, ensuring both ethical data governance and improved model performance in sensitive domains are outlined.

Kyle Ellrott, V. Malladi, J. Bélisle-Pipon et al. · 0 citations

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