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Sponsored AI Networking Cookbook: Practical recipes for AI-assisted network automation and development AI Networking Cookbook: Practical recipes for AI-assisted network automation and development

Author

S. Sumner

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Open access Oct 2026

EXCON: a scalable, reproducible Nextflow pipeline for CAFE-based gene EXpansion and CONtraction analysis

Gene family expansion and contraction analysis is a commonly used approach in evolutionary comparative genomics to identify lineage-specific evolutionary pressures on gene copy/family number. CAFE is one of the most popular tools to measure changes in gene family size, but requires a high level of bioinformatics expert...

Christopher D. R. Wyatt, Fernando Duarte, Alexandra Cerqueira de Araujo et al. · 0 citations
Open access Aug 2026

nf-core/genomeqc: a best-practice pipeline for comparing genome and assembly quality

The rapid growth in publicly available genome assemblies has made selecting genomes suitable for downstream analyses increasingly challenging. Differences in assembly and annotation quality can influence gene completeness, duplication rates, contiguity, repeat representation, and other characteristics. Assessing genome...

Christopher D. R. Wyatt, Fernando Duarte Frutos, Stephen D. Turner et al. · 0 citations

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