Author

Samweli Y. Bahati

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Open access Aug 2026

Host breadth, genomic exchange and antimicrobial-resistance evolution in East African Campylobacter

Campylobacter jejuni and Campylobacter coli occupy diverse animal reservoirs, yet the genomic processes associated with variation in host breadth remain poorly resolved in East Africa. Publicly available isolate-level whole-genome sequencing data from Ethiopia, Kenya, Tanzania and Uganda were analysed using a standardi...

Samweli Y. Bahati, E. Mwakalapa, H. Mung’ong’o et al. · bioRxiv · 0 citations

Open access Aug 2026

Genome-resolved surveillance of African Klebsiella oxytoca species complex genomes reveals resistome-mobilome and biosynthetic gene cluster diversity

These data define an African genome-resolved baseline for KoSC diversity and identify species-structured biosynthetic loci alongside heterogeneous resistance and mobilome profiles and identify specific lineages and genomic features for future population-based sampling, complete-genome reconstruction, and laboratory val...

Samweli Y. Bahati, Abdalah Makaranga, L. Hoyles et al. · bioRxiv · 0 citations

Open access Aug 2026

Conserved intracellular virulence architecture and focal genomic diversification in sub-Saharan African Brucella melitensis

The available regional genomes therefore comprise multiple phylogenetic lineages within a strongly conserved gene and intracellular virulence framework, with diversity concentrated in core-genome SNPs and localized genomic regions.

Samweli Y. Bahati, E. Mwakalapa, H. Mung’ong’o et al. · Microbiology spectrum · 0 citations