Open access
Jul 2026
ProtSyntax: a protein large language model for decoding post-translational modification syntax and function
ProtSyntax is introduced, a PTM-aware foundation protein language model combining protein-aware positional encoding, bidirectional state-space propagation, geometry-constrained attention and adaptive multi-objective learning that has the potential to decode the regulatory language of the modified proteome.
Yiyu Lin, Jiahui Wu, You Zhou et al.
· bioRxiv · 0 citations