Author

Shan Yu

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#machine learning Preprint Oct 2026

Auditable Algebraic Counting Field for Cryptic-Pocket Detection from Apo Structures

Cryptic ligand-binding pockets are not apparent in experimentally determined apo structures, making them difficult to identify from unbound receptor geometry. A complementary challenge is to make the structural measurements and learned evidence behind each prediction directly inspectable. We introduce a supervised alge...

Shan Yu, Xue-Ning Wu · 0 citations

Jul 2026

Closed-Loop Knowledge Dynamics: An Operational Framework for Saturation and Escape

This analysis explains why conditional mutual information alone cannot certify escape and measures variation among intervention-conditioned updates rather than departure from the no-intervention law.

Xuening Wu, Shan Yu, Shen Yin · arXiv.org · 0 citations