Author

Soham Mukhopadhyay

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Open access Oct 2026

Global population genomics and pangenome of the clubroot pathogen link clonal expansion and effector diversification to resistance breakdown in canola

Clubroot disease, caused by the obligate biotrophic protist Plasmodiophora brassicae, threatens Brassica crops worldwide. Novel pathogen virulence frequently breaks resistance in agricultural crops, and yet explanations for isolate evolution remain unknown. We combined whole-genome sequencing of 192 isolates from 24 co...

Muhammad Asim Javed, Florent Sylvestre, Sandra M. Velasco-Cuervo et al. · bioRxiv · 0 citations

Open access Sep 2026

The chromosome level genome of the Blueberry Stem Gall Wasp, Hemadas nubilipennis (Hymenoptera: Ormyridae) on lowbush blueberry (Vaccinium angustifolium) reveals repeat-driven expansion

Gall-inducing insects are important models for studying plant-feeding lifestyle evolution, but genomic resources remain scarce. We present the first chromosome-level genome for the blueberry stem gall wasp (Hemadas nubilipennis), a native North American species now reaching outbreak densities on cultivated highbush blu...

Y. M. Zhang, Adam J. Kranz, Renée L. Corpuz et al. · bioRxiv · 0 citations

Open access Jul 2026

A Clubroot Pathogen PBS3-Like Effector Manipulates Hormonal Crosstalk to Alter Root Morphology in Arabidopsis and Canola.

A model in which PbGH3 modulates SA-associated hormonal crosstalk and root morphology that could be harnessed by the clubroot pathogen to ensure host colonization is supported.

M. Gonzalez-Garcia, Jiaxu Wu, Marina Silvestre Vañó et al. · Molecular Plant-Microbe Inte... · 0 citations

Open access Jul 2026

RenSeq and whole genome sequencing uncover allelic diversity of clubroot resistance genes in commercial breeding canola lines

Structural variation affecting LRR and C-JID regions suggests that allele-level diversity within conserved NLR loci contributes to CR-associated variation, with implications for allele-specific marker development and durable CR deployment.

Jiaxu Wu, Soham Mukhopadhyay, Muhammad Asim Javed et al. · bioRxiv · 0 citations