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Author

T. Stinear

2 papers indexed here

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Open access Sep 2026

Pathogen genome enrichment sequencing to support a city-wide Legionnaires’ disease outbreak investigation

Abstract Pathogen genomics can provide high-confidence source attribution for epidemiological investigations of Legionnaires' disease (LD) outbreaks. However, the utility of culture-based genomics can be undermined by long lead times for Legionella pneumophila culture or a lack of isolates when dealing with non-cultura...

K. Mercoulia, J. Lacey, G. Taiaroa et al. · 0 citations
Review Open access Jul 2026

Large language models enable consensus-level interpretation in metagenomic diagnostics

Abstract Metagenomic sequencing can detect a broad range of pathogens, but interpreting which detections are clinically relevant requires expert adjudication that is difficult to scale and standardize. Here we present diagnostic classifiers that formalize expert adjudication by combining structured decision trees with...

E. Steinig, M. Krysiak, K. Deo et al. · 0 citations

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