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Usman Rashid

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Open access Aug 2026

nf-core/genomeqc: a best-practice pipeline for comparing genome and assembly quality

The rapid growth in publicly available genome assemblies has made selecting genomes suitable for downstream analyses increasingly challenging. Differences in assembly and annotation quality can influence gene completeness, duplication rates, contiguity, repeat representation, and other characteristics. Assessing genome...

Christopher D. R. Wyatt, Fernando Duarte Frutos, Stephen D. Turner et al. · 0 citations

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