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Author

Vinzent Risch

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Open access Sep 2026

MOSHPIT: Accessible, reproducible metagenome data science on the QIIME 2 framework.

Metagenome sequencing has revolutionized functional microbiome analysis across diverse ecosystems but is fraught with technical hurdles. We introduce MOSHPIT (MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking; https://moshpit.qiime2.org)-software built on the QIIME 2/rachis framework (Q2F) that i...

M. Ziemski, Liz Gehret, Anthony Simard et al. · 0 citations

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