Author

Xiao-Xi Zhang

2 papers indexed here

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Preprint Oct 2026

Multi-Scale Temporal Flows for Peptide Trajectory Generation

Peptides occupy a particularly challenging regime of biomolecular dynamics. Short peptides lack a stable folded core and populate broad conformational ensembles, while cyclization adds ring closure, non-local residue coupling, and stereochemical diversity. Deep generative models have made remarkable progress in emulati...

Xi-Chen Sun, Wen-Tao Wei, Xiao-Xi Zhang et al. · 0 citations

Open access Oct 2026

Carbon-A: Unified Genome Annotation across Eukaryotic Diversity

Structural genome annotation remains a bottleneck in eukaryotic genomics as conventional methods depend on external evidence that is unevenly available across the tree of life, and existing ab initio predictors are typically specialized for particular taxonomic groups. We introduce Carbon-Annotator (Carbon-A), a 1.2-bi...

Georgia Channing, Zheng Shi, Xiao-Xi Zhang et al. · bioRxiv · 0 citations