Yao-Xiang Li

fp-tools: A Reproducible Platform for ATAC-seq Footprinting and Regulatory Motif Analysis

Background/Objectives: ATAC-seq footprinting can infer transcription-factor (TF) occupancy across the genome at near-base-pair resolution. However, its broad adoption is limited by high computational demands, complex command-line workflows, and fragmented support for bulk data with biological replicates and single-cell...