Background: Bipolar disorder (BIP) and obsessive-compulsive disorder (OCD) frequently co-occur and show evidence of genetic overlap, yet the specific pleiotropic loci and their functional mechanisms remain unclear. Methods: We conducted large-scale genetic analyses using GWAS summary statistics for BIP and OCD, excluding 23andMe data. We applied conjunctional FDR analysis to identify pleiotropic variants jointly associated with BIP and OCD, followed by integrative annotation through transcriptomic (eQTL, sQTL), epigenomic (mQTL, haQTL), and proteomic (pQTL, histone PTM) data. SMR analysis was used to prioritize putative regulatory effects, while AlphaGenome predictions and targeted histone proteomics were employed to evaluate allele-specific chromatin changes. Results: We observed a significant genetic correlation (rg = 0.38, P = 3.8 x 10-29) and extensive polygenic overlap between BIP and OCD. Bidirectional MR supported causal effects in both directions, with stronger evidence for BIP influencing OCD risk. ConjFDR analysis revealed 2,143 pleiotropic SNPs jointly associated with BIP and OCD, with convergent signals at the ITIH3/ITIH4 locus. Summary-data-based Mendelian randomization (SMR) and colocalization with multi-omic QTLs (eQTL, pQTL, mQTL, and haQTL) further prioritized the ITIH3/4 locus, where multiple SNPs (e.g., rs3774364) colocalized with H3K27ac histone acetylation QTLs in the prefrontal cortex (PP_H4 > 0.5). Integrated PBMC RNA-seq and complementary histone mass spectrometry linked immune--ECM transcriptional activity to exploratory global histone acetylation changes in BIP and OCS-BIP, with suggestive alterations in H3K27ac-containing peptides. Conclusions: Our multi-omic analysis highlights ITIH3/ITIH4 as a prioritized pleiotropic locus for BIP and OCD. Epigenetic regulation, particularly through histone acetylation, may underlie shared susceptibility and offers a novel mechanistic link between these psychiatric disorders.
W. Wang, P. Ju, Z. Wen et al.· medRxiv· 0 citations
Background: Recurrence rates following curative resection for hepatocellular carcinoma (HCC) remain persistently high, benefit from adjuvant immunotherapy varies substantially across patients, and the field currently lacks a standardized framework to characterize the postoperative host immune contexture. Purpose: To propose and validate a Multi-stage Precision Stratification (MPS) framework and evaluate its value in prognostic stratification and prediction of immunotherapy response. Methods: The Immune Health Index (IHI = S + R - E) integrating immune surveillance (S), immune exhaustion (E), and immune reserve (R) was constructed to define four immune phenotypes. Prognostic value was assessed in four public HCC cohorts (n=931) with single-cell transcriptomic validation (GSE140228, 61,690 cells); a blood-count-based clinical version cIHI_v8 was constructed in the Qinghai QPHCC cohort (n=490 survival analysis). Results: IHI was an independent protective prognostic factor in TCGA-LIHC (multivariate HR=0.795, P=0.034); four-cohort random-effects meta-analysis yielded HR=0.818 (95% CI: 0.696-0.961), I-squared=31.4%. QPHCC cIHI_v8 multivariate HR=0.452, HR=0.715 after ALBI adjustment; Bayesian evidence synthesis yielded BF_10=1280 for cIHI_v8 (>100 constitutes Decisive evidence), whereas the 4-cohort meta BF_10=2.19 (Anecdotal). Following NLP-based reverse stage derivation (n=490, achieving full AJCC/BCLC stage coverage from 0%), IHI remained significant after AJCC adjustment (HR=0.8642, P=0.000079), IHI provided positive incremental C-index across all stage-adjusted models; stratified analysis showed the strongest effect in early-stage (AJCC I-II: HR=0.8109, P<0.0001) and MVI-negative patients (HR=0.8538, P=0.0020). Bootstrap 1000x resampling: median HR=0.8646 (95% CI: 0.7985-0.9443), all iterations yielded HR<1. Conclusions: The MPS framework provides a mechanism-driven biological stratification tool for adjuvant immunotherapy in post-resection HCC, moving from "fixed-protocol extrapolation" to "immune contexture navigation."
Z. Dang, J. Dan, W. Su et al.· medRxiv· 0 citations
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