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Open access Sep 2026

Less Can Be Better: Decomposing Clinical Data Modalities in Large Language Model-based Healthcare Applications

Objective To systematically examine different clinical data modalities in large language models (LLMs) and multimodal large language models (MLLMs), and to quantify the contribution of data modalities in early inpatient risk prediction and decision support tasks. Materials and Methods We conducted a systematic analysis using MIMIC-IV, MIMIC-IV-Note, and MIMIC-CXR-JPG datasets to create a unified cohort of 22,254 hospital admissions containing structured electronic health records (EHRs), radiology reports (clinical notes), and chest X-ray images. We evaluated general-purpose and medical-adapted LLM/VLMs across uni-, bi-, and tri-modal configurations on two risk prediction tasks (in-hospital mortality and length-of-stay [LOS] prediction) and two clinical decision support (CDS) tasks (discharge diagnosis phenotyping and medication-use prediction). Results For risk prediction tasks, structured EHR data alone achieved the best or comparable performance (best mortality AUROC: 0.849; LOS AUROC: 0.868), with limited incremental benefit observed from adding radiology reports or medical images. For CDS tasks, multimodal integration yielded substantial improvements: the best tri-modal configuration achieved F1-scores of 0.589 (diagnosis) and 0.405 (medication), representing 21.4% and 18.4% improvement over the best unimodal approach. Radiology reports consistently outperformed raw single-view chest radiographs as a supplementary modality. MLLMs demonstrated better zero- and few-shot performance than unimodal LLMs. Multi-view imaging consistently improved performance over single-view across all tasks. Conclusion The benefits of multimodal data integration are task-dependent. Healthcare LLMs should examine clinical data modalities according to specific tasks for efficient integration. These findings provide practical guidance for designing efficient clinical decision support systems.

Cheng Peng, Mengxian Lyu, Ziyi Chen et al. · 0 citations
Preprint Aug 2026

An Agentic Generative Large Language Model for Treatment Planning of Colorectal Cancer

Treatment planning in precision oncology requires synthesizing heterogeneous patient information with rapidly evolving clinical guidelines to ensure guideline-concordant care. While large language models (LLMs) show promise in many diagnostic tasks, their adoption for high-stakes treatment planning is hindered by complex reasoning, adherence to timely clinical guidelines, and safety concerns. In this study, we present GatorOnco, an agentic LLM for colorectal cancer (CRC) treatment planning. GatorOnco is developed using a total of 282 billion tokens of biomedical text, including healthcare system-scale clinical text comprising 166 billion tokens from UF Health. We implemented a domain-adaptation method that integrates pre-training, model merging, a two-stage post-training approach, and agent-based reinforcement learning. An agentic retrieval-augmented generation (RAG) approach dynamically integrates time-sensitive clinical guidelines into the reasoning process. In a blind, randomized clinical evaluation conducted by five UF Health oncologists, GatorOnco significantly outperformed open-source LLMs (P<0.01) and achieved expert-level performance comparable to UF Health oncologists. Compared with expert oncologists, GatorOnco received significantly higher ratings for readability (4.46 vs. 4.19, P<0.01) and completeness (3.91 vs. 3.52, P<0.01), while showing statistically comparable performance in correctness (4.09 vs. 4.11, P = 0.921), currency (4.04 vs. 3.98, P = 0.478), and safety (4.22 vs. 4.22, P = 0.999). These findings demonstrate that integrating agentic reasoning with large-scale domain adaptation can help bridge the gap for generative AI in high-stakes cancer treatment planning.

Mengxian Lyu, Cheng Peng, Tim Jang et al. · 0 citations

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