A global genomic atlas of >7,000 MAGs/genomes from infants, domesticated animals, non-human primates, and ancient humans helps explain subspecies differentiation in the gut microbiota of Western and non-Western infants and provides a framework for community-mediated interventions in early life.
This study reconstructed the first comprehensive pangenome of B. bifidum using 1,351 high-quality genomes, including metagenome-assembled genomes to identify species-specific genetic and functional features and identified significant gain-of-function events.
Emanuele Selleri, G. Longhi, C. Tarracchini et al.· Microbiome Research Reports· 0 citations
This study provides genome- and spatially resolved views of dominant SCB in holothurians and offers evolutionary insights into host-interface diversification in the deep-sea holothurian body wall.
Multi-omics findings suggest a host-microbiome system potentially associated with the utilization of chemically complex, low-quality forage, providing a framework for understanding digestive features of browsing ruminants and for conserving host-associated gastrointestinal microbiomes.
Yuming Chen, Juntao Ma, Zhifan Guo et al.· npj Biofilms and Microbiomes· 1 citation
This study demonstrates that several Bifidobacterium species residing in the gut of gummivorous primates, such as marmosets, possess previously uncharacterised pathways for the efficient utilisation of type-II arabinogalactan (AG), the major polysaccharide component of tree gums.
Yuki Sasaki, Tomoya Kozakai, Moe Inoue et al.· The ISME Journal· 0 citations
This study uses the family Annonaceae as a model lineage to reconstruct the region’s evolutionary trajectories, integrating hundreds of nuclear markers derived from both historical and contemporary herbarium specimens and reveals consistent patterns of floristic and evolutionary differentiation.
Andrés Ernesto Ortíz Rodríguez, Laura Holzmeyer, Leopoldo Hurtado-Reveles et al.· Botanical Sciences· 2 citations
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