This work presents a slide-level framework generating prostate biopsy reports that is language-independent by construction: tokenizer and model are trained from scratch, and institutions can thus train native-language reporting models on their own archives.
Abstract
Prostate cancer is among the most frequently diagnosed malignancies worldwide, and structured reporting of each biopsy core burdens pathologists. Existing tools frame this as classification, leaving pathologists to assemble coherent reports, while many slide-level vision-language models rely on English-centric encoders that transfer poorly to other clinical languages. We present a slide-level framework generating prostate biopsy reports that is language-independent by construction: tokenizer and model are trained from scratch, demonstrated here in German. To address paired-data scarcity, an automated pipeline uses a locally deployed large language model to split composite reports into core-specific image-text pairs, yielding 17,344 pairs from 2,402 historical cases without manual annotation. Evaluated for clinical attributes rather than linguistic similarity, the model achieves 96.2% F1 for malignancy detection and 65.2% for Gleason grading, competitive with an FDA-cleared classifier. Grading is further validated on three external cohorts with latent-space augmentation. Institutions can thus train native-language reporting models on their own archives.
A clinically curated Pan-Asia WSI--report dataset is introduced and the REG 2025 benchmark is established as a benchmark for evaluating WSI-based structured report generation and vision-language understanding in computational pathology, providing insights for the design of clinically grounded multimodal pathology model...
Yu-Mi Lee, Harim Oh, Hyo-yun Kim et al.· 0 citations
EndoCLIP, a colonoscopy vision-language foundation model trained on 125,756 lesion-level image-text pairs progressively recovered from 280,476 routine colonoscopy records, is developed, suggesting that recovering finding-to-frame correspondence can transform routine documentation into scalable supervision, enabling cli...
Jia Yu, Yan Zhu, Yili He et al.· arXiv.org· 0 citations
TLM-Oncology extracted detailed cancer staging information for five cancers from a variety of clinical documentation within a single integrated health system with high precision and turned data that were previously inaccessible into a valuable resource for downstream use.
S. Abhyankar, Rajesh Rao, Mehraveh Salehi et al.· JCO Clinical Cancer Informat...· 1 citation
A multi-source Masked Autoencoder (MAE) framework, named ProsMAE, for histopathology representation learning, which achieved a higher mean validation quadratic weighted kappa (QWK) than the vanilla MAE frozen linear-probe baseline under the evaluated disjoint PANDA split.
Anna Jung, Kyeonghun Kim, Youngung Han et al.· arXiv.org· 0 citations
This study addresses cross-organ adenocarcinoma segmentation by introducing an evidence-guided vision–language segmentation framework that incorporates pathology-relevant morphological evidence into dense mask prediction and support the use of structured pathology evidence for cross-organ tumor segmentation under sourc...
This paper finetune two report generation models with an attention-alignment loss that regularizes the model attention over image patches to match the distribution of pathologist attention, providing stronger visual support for the generated reports by highlighting the regions that most influence the output.
Ruo-Yu Xue, S. Singh, Souradeep Chakraborty et al.· arXiv.org· 0 citations
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