Aug 2026· Biomaterials Advances· Vol 189, pp.
215097
· 0 citations· 121 references
Medicine
TL;DR
This review systematically summarizes the core framework of machine learning-assisted peptide material design, covering three core components: data acquisition, feature engineering, and model selection and training.
Abstract
Peptide materials have shown their great promise in precision cancer therapy due to their accurate target recognition ability, diverse anti-tumor mechanisms, and biocompatibility. However, conventional peptide discovery largely relies on trial-and-error methods, which are inherently limited by lengthy development cycles, inefficient exploration of the vast sequence space, and inadequate characterization of structure-activity relationships. Recent advances in machine learning have fundamentally transformed peptide material design by shifting the discovery paradigm from empirical trial-and-error to data-driven rational design. This review systematically summarizes the core framework of machine learning-assisted peptide material design, covering three core components: data acquisition, feature engineering, and model selection and training. We focus on the cutting-edge research progress of machine learning in enhancing the tumor targeting of peptide materials and developing new anti-tumor peptide materials, and introduce the professional databases and algorithm tools that support the development of this field. Finally, we discuss the major challenges facing in machine learning-driven design of tumor-targeted peptide materials, and suggest the future development direction in this field, aiming to provide a systematic theoretical reference for the rational design and clinical translation of novel tumor-targeted peptide materials.
How advances in artificial intelligence and computational modeling may reshape the rational design of next-generation peptide therapeutics is explored and an integrated experimental–computational framework is proposed to facilitate the development of clinically actionable candidates is proposed.
Ha Thi Ngoc Nguyen, B. Le, Nhung Thi Hong Van et al.· Pharmaceuticals· 0 citations
This review systematically examines the key methodological innovations, including peptide representation learning, multi-modal fusion strategies, multi-label learning paradigms, and emerging predictive frameworks empowered by deep neural architectures and ProtLM-based embeddings, and summarizes the practical applications of these models in peptide database mining, functional mechanism interpretation, and mutation effect prediction.
A snapshot of AI-driven technologies for AMP design is provided and two modes of AI-driven technologies for AMP design are surveyed, one concentrated on identifying whether current data possess antimicrobial activity and the other on generating AMP candidates with potential therapeutic properties (generation-oriented).
Yongqiang Liu, Jie Hu, Ning Zhang et al.· Synthetic and Systems Biotec...· 0 citations
This review systematically summarizes advancements in peptide‐based therapeutics for solid tumors from 2020 to 2025, and highlights the transformative role of artificial intelligence (AI) in peptide design and discovery.
Jinqiu Liang, Xiaochuan Tang, Haoqi Li et al.· Journal of Peptide Science· 0 citations
The current role of AI is summarized across the peptide cancer vaccine development pipeline, from neoantigen discovery and epitope prioritization to prediction of peptide–HLA binding, antigen presentation, and T-cell receptor recognition, and the application of modern computational frameworks.
P. Brlek, Jan Kolić, L. Bulić et al.· Frontiers in Genetics· 0 citations
A data-driven, multi-objective peptide design framework that inte-grates sequence-to-feature transformations using Fast Fourier Transform - based representations, and metric-learning based optimization strategies, to provide an interpretable and computationally efficient alternative for peptide design under limited-data constraints.
A. Trinh· Proceedings of the 3rd Found...· 0 citations