Jul 2026· Journal of genetics and genomics = Yi chuan xue bao· 0 citations· 61 references
Medicine
TL;DR
It is reported that Prdm15 deficiency in HSPCs induces the accumulation of immature hematopoietic stem cells in mice, establishing PRDM15 as a critical epigenetic regulator of HSPCs, offering valuable insights into the molecular mechanisms underlying hematopoietic homeostasis.
Abstract
The maintenance of homeostasis in hematopoietic stem and progenitor cells (HSPCs) is essential for the proper development of the entire hematopoietic system. However, the mechanisms underlying this regulatory equilibrium remain elusive. Here, we report that Prdm15 deficiency in HSPCs induces the accumulation of immature hematopoietic stem cells in mice. A series of transplantation assays shows that these cells display impaired reconstitution capacity and competitive fitness, which are associated with abnormal differentiation trajectories and transcriptional alterations identified by single-cell RNA sequencing. Mechanistically, integrated multi-omics analyses including ATAC-seq and CUT&Tag sequencing of HSPCs indicate that Prdm15 deficiency induces significant transcriptional and epigenetic alterations, particularly affecting the methyltransferase KMT2C and altering H3K4me1 and H3K27ac modifications at the promoters of hematopoietic developmental genes. Collectively, our findings establish PRDM15 as a critical epigenetic regulator of HSPCs, offering valuable insights into the molecular mechanisms underlying hematopoietic homeostasis.
This study identifies molecular signatures of systemic aging rooted in bone marrow HSPCs and suggests that dysregulated ribosomal protein gene expression is an under‐appreciated hallmark of hematopoietic stem cell aging.
Roger Atanga, Saurav Mallik, Soumita Seth et al.· Advances in Biology· 0 citations
It is suggested that CHAF1A enhances the activity of NF-Y family transcription factors to sustain HSC stemness and inhibits the function of CEBP family transcription factors to block HSC differentiation.
Jin Liu, Meng-Du Xiao, Wanling You et al.· Sheng li xue bao : [Acta phy...· 0 citations
Observations advance basic understanding of the HSPC niche and could allow us to inform future clinical strategies to improve HSPC expansion ex vivo, and could allow us to inform future clinical strategies to improve HSPC expansion ex vivo.
Reema A. Elrefaie, Gwendolyn M. Beacham, Zewde Q. Ingram et al.· Cancer Research· 0 citations
In insight into HSC aging, Pbx1 is identified as a key regulator of these age-related transcriptional and differentiation changes and may inform approaches to modulate age-associated HSC dysfunction.
Perturbation-derived co-regulation programs are established as an interpretable framework for linking genetic regulators, cell-biological processes and stem-cell-associated phenotypes by decomposing gene expression data from functional and clinical studies into program activity.
Joseph S. Bowness, Aina Bernal Martínez, Jan Bařinka et al.· bioRxiv· 0 citations
Single-cell RNA sequencing indicates that adulthood Rack1 deletion in type I interferon-I-responsive cells leads to aberrant lineage-geneset-scores of transcriptional HSCs and the emergence of stressed HSCs, and Mechanistically, RACK1 prevents HSC loss through maintaining the protein level of LDB1.
L. Deng, Jun-Jie Du, Zhe Xu et al.· Cell Death & Disease· 0 citations
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