Linkage map and single nucleotide polymorphism association with growth traits and flesh color in the oyster pompano (Trachinotus anak)

Sang Van Vu Cedric Gondro Anh Tran Ngoc Nguyen P. Rastas Nhật Hồng Phạm Hai The Pham Giang Truong Cao Shantanu Kundu T. T. Diep Thu Thi Anh Nguyen Quang Duc Tran Zi-Qiang Han Tiep Khac Nguyen Tung Thanh Ta Juergen Geist Cuong Ngoc Duong Hau Thi Khong James W. Kijas A. Bùi Ánh Thị Phương Lê H. Van Doan In Van Vu

Aug 2026 · Aquaculture International · Vol 34 · 0 citations · 52 references

TL;DR

A SNP-based genetic linkage map is constructed and a genome-wide association study is performed to identify loci associated with growth and flesh color traits in the oyster pompano, providing valuable genomic resources and insights into the genetic architecture of economically important traits in T. anak.

DOI Semantic Scholar

View source

Similar papers

Aug 2026

Construction of a genetic linkage map and QTL mapping of growth-related traits in giant freshwater prawn, Macrobrachium rosenbergii.

Growth-related traits are major determinants of production performance in the giant freshwater prawn, Macrobrachium rosenbergii, but their genetic architecture remains incompletely resolved. An F1 full-sib family of 133 individuals and two parents was analyzed, with the two parents genotyped using high-depth whole-geno...

Ti Wang, Shu-Hui Shen, Xilin Dai et al. · Comparative Biochemistry and... · 0 citations

Open access Sep 2026

Genome-Wide Association Study of Spawning Traits and Candidate Gene Mining in Portunus trituberculatus

Portunus trituberculatus is a commercially crucial marine aquaculture crab species in China, renowned for its high economic value. Spawning performance is one of the most important target traits in selective breeding programs for this species; however, the genetic architecture underlying this trait remains largely unch...

Xiao-Tong Pan, Shao-Ting Jia, Dongfang Sun et al. · International Journal of Mol... · 0 citations

Open access Sep 2026

Genome-wide association study of morphometric and metabolic characteristics in European populations of the sugar kelp Saccharina latissima.

The sugar kelp Saccharina latissima is a promising candidate for sustainable aquaculture in the North Atlantic and Northeast Pacific, but genetic improvement has been hindered by a limited understanding of the genetic basis of economically important traits. We conducted a genome-wide association study (GWAS) for this s...

S. Mauger, K. Avia, Lucie Jaugeon et al. · Journal of Phycology · 0 citations

Open access Oct 2026

Association mapping and genome prediction reveal a complex genetic architecture for resistance to black and frosty pod rot in cacao (Theobroma cacao L.) populations

Abstract Cacao (Theobroma cacao L.) production is severely constrained by black pod rot (BPR) and frosty pod rot (FPR), two major diseases that cause substantial yield losses across the tropics. Breeding for disease resistance remains challenging due to long generation intervals and the complex genetic control of disea...

Elisa Jacquotte, James A. Holzwarth, Ana Zotta Mota et al. · The Plant Genome · 0 citations

Open access Oct 2026

Integrative Genomic Analyses Identify and Prioritize Candidate Loci for Metatarsal Length and Circumference in Broilers

The measured length and circumference of the metatarsal bone in 330 male broilers and whole-genome data were analyzed to identify genetic regions associated with these traits and identified candidate markers that may support future breeding efforts focused on improving broiler leg traits.

Heng-Cong Chen, Xin-Quan Li, Xing Fan et al. · Animals · 0 citations

Open access Aug 2026

Identification of Candidate Genes Associated with Growth Traits in Procambarus clarkii Using Whole-Genome Resequencing

The findings provide new insights into the genetic mechanisms underlying growth and development in P. clarkii, and two candidate genes associated with growth traits serve as promising candidates for further functional studies and genetic improvement of this species.

Jian Li, Ping-Ping Hu, Hui-Ling Zhang et al. · International Journal of Mol... · 0 citations