Biomolecular condensates can undergo striking changes, such as transitioning from a liquid-like to a gel- or a solid-like aggregate due to changes in molecular interactions in response to changes in the biochemical environment. The question of how modified molecular interactions lead to such a transition in the material properties and spatial organization of condensates has not yet been elucidated. To address this question, we represent the biochemical environment as a triphasic mixture comprising a liquid-like protein-rich phase, a network-like protein-rich phase, and solvent. Owing to a change in the biochemical environment, protein molecules can reversibly switch between two conformational states. In a switched conformational state, the cross-linking domains of molecules are exposed which promote transient network formation in phase separated states. We develop a transient-network model and a continuum framework that couples phase separation, molecular switching, and dynamic cross-linking to predict condensate morphology and mechanics. The transient-network model predicts that a non-aging network behaves like a Maxwell fluid. When a network slowly ages via stabilization of cross-links, it shows Maxwell-like behavior and waiting time-dependent relaxation. However, a strongly aged network shows elastic recoil like characteristic of a Kelvin-Voigt solid. Our coupled continuum model demonstrates that the interplay of molecular switching and dynamic cross-linking in network formation shapes the spatial organization of condensate phases. In summary, this work demonstrates a mechanistic route explaining how conformational switching and molecular cross-linking regulate material properties and morphology of condensates.
An overview of solid-state NMR approaches that are readily applicable and potential methodological developments to investigate protein condensates and coacervates as well as to study protein phase separation and phase transitions are discussed.
Seamoon Deb, Erick J Dufourc, B. Habenstein et al.· Biophysical Chemistry· 0 citations
This framework generates testable predictions concerning the relaxation time spectrum of interstitial gels, entropy-production markers in cells embedded in collapsed versus swollen matrix, and the nonlinear vibrational dynamics observable during effective physical intervention.
Relations between structural properties and their variations due to phase transitions under variable thermodynamic conditions are of central interest in material science. More than a decade ago, the discovery of elastic bending in single crystals of caffeine cocrystal solvates opened up a new area of research in the...
Somnath Dey, Hans Gildenast, S. Nandi et al.· Crystal Growth & Design· 0 citations
Cure-induced shrinkage in thermosetting polymers is generally assumed to reflect progressive densification during network formation. Here, we show that this assumption breaks down at gelation, which marks a transition in structural evolution. Using a model epoxy system, direct shrinkage measurements, wide-angle X-ray s...
Rearranging hydrogels are used for applications that require tailored control of solid- and liquid-like properties. These applications necessitate pinpointing the phase transition, where a sample-spanning structure is formed or broken. To characterize the mechanical properties at the phase transition, we use time-cur...
Gautam V. Khare, Kristi S. Anseth, Kelly M. Schultz· ACS Macro Letters· 0 citations
Viscoelastic phase separation governs the nonequilibrium demixing dynamics of soft-matter systems. Here, we introduce an efficient continuum framework that couples the Cahn-Hilliard phase-field model with the Oldroyd-B constitutive equation. By treating the mixture as a single incompressible fluid, our model captures m...
Di-Xi Yang, Jia-Xing Yuan· Journal of Chemical Physics· 0 citations
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