Sep 2026· Zenodo (CERN European Organization for Nuclear Research)
Abstract
This paper introduces a novel approach to Neural Architecture Search (NAS) that leverages dynamic topology optimization based on dependency relationships. Traditional NAS methods often suffer from inefficiency and limited generalization due to the use of static search spaces and a lack of consideration for intricate layer-level dependencies within neural networks. Our method addresses these limitations by treating a neural network architecture as a graph, where nodes represent layers and edges represent dependencies. A dynamic search algorithm, guided by a dependency scoring function and topological constraints, iteratively modifies this graph's topology to explore a more efficient and effective search space. The core claim is that this dynamic approach, which explicitly models and optimizes topology, significantly improves both the efficiency and generalization capabilities of NAS. The algorithm incorporates a dependency scoring function that evaluates architecture changes based on dependency relationships and performance metrics, while topological constraints prevent drastic and potentially detrimental architectural alterations. The results demonstrate the effectiveness of this dynamic topology-dependent approach compared to conventional static NAS methods.
Agile methods continue to gain popularity. In particular, the Scrum method appears to be on the verge of becoming a de-facto standard in the industry, leading the so called Agile movement. While there are success stories and recommendations, there is little scientifically valid evidence of the challenges in the adoptio...
A. Marchenko, P. Abrahamsson· Agile Conference· 59 citations· ⚡11
A comprehensive taxonomy of the challenges faced when a medium-scale organization decided to adopt software platforms is provided, namely: business challenges, organizational challenges, technical challenges, and people challenges.
Yaser Ghanam, F. Maurer, P. Abrahamsson· Information and Software Tec...· 41 citations· ⚡3
It is shown that high article processing charges are not sufficiently justified by the publishers, which often lack transparency and may prevent authors from adopting OA.
D. Graziotin, Xiaofeng Wang, P. Abrahamsson· Scientometrics· 21 citations· ⚡1
MCGLPPI, a novel geometric representation learning framework that combines graph neural networks (GNNs) with the MARTINI molecular coarse-grained (CG) model to predict overall PPI properties accurately and efficiently, offers an effective and efficient solution for PPI overall property predictions.
Yang Yue, Shu Li, Yihua Cheng et al.· bioRxiv· 15 citations
Abstract Predicting properties from coordinate–category data—sets of vectors paired with categorical information—is fundamental to computational science, manifesting in materials science as predicting formation energies or elastic moduli from crystal structures. While large language models (LLMs) have increasingly been...
Nawaf Alampara, Santiago Miret, Kevin Maik Jablonka· Nature Computational Science· 13 citations
PepPCBench enables a robust evaluation of PFNN-based methods and supports their continued development for peptide-protein structure prediction, and highlights the influence of peptide length, conformational flexibility, and training set similarity on prediction accuracy.
Si-Long Zhai, Huifeng Zhao, Ji-Ke Wang et al.· Journal of Chemical Informat...· 13 citations· ⚡1
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