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Author

Dongsheng Cao

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Book Open access Aug 2026

Beyond Reaction Data: Learning Chemical Knowledge from Large-Scale Molecules for Retrosynthesis

This work proposes KnowRetro (Knowledge-Guided Retrosynthesis Prediction), a chemically-aware framework that learns chemical knowledge from large-scale unlabeled molecules to enhance the accuracy and diversity of retrosynthesis prediction.

Yu-Jie Chen, Tengfei Ma, Zhou Yu et al. · 0 citations
Book Open access Aug 2026

Beyond Reaction Data: Learning Chemical Knowledge from Large-Scale Molecules for Retrosynthesis

Retrosynthesis, the process of predicting reactants from products, remains a critical challenge in computational chemistry and drug discovery. While recent deep learning methods have shown strong performance, they remain overly reliant on reaction datasets, which are limited in availability and quality. Large-scale unl...

Yujie Chen, Tengfei Ma, Zhou Yu et al. · 0 citations
#machine learning Open access Sep 2025

Unified and explainable molecular representation learning for imperfectly annotated data from the hypergraph view

OmniMol is presented, a framework using hypergraphs to improve predictions of molecular properties, addressing challenges of imperfect data annotation and enhancing model explainability, and achieves state-of-the-art performance in properties prediction.

Bowen Wang, Junyou Li, Donghao Zhou et al. · 11 citations
#machine learning Open access Nov 2025

A fused deep learning approach to transform drug repositioning

A deep learning framework that integrates knowledge graph embedding and pre-training strategies to overcome the intractable cold start issue, achieving superior performance and interpretability in drug repurposing is introduced.

Kun Li, Jiacai Yi, Qing Ye et al. · 1 citation

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