Author

Kenta Nakai

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#gene editing Open access Oct 2026

VINTER: a generative vision–language model for annotating and interrogating spatial tissues

Spatial transcriptomics links gene expression to tissue structure, yet current models learn embeddings whose meaning is assigned afterwards or read histology without measured expression. Tissue decisions are therefore rarely made from morphology, genes and neighbourhood together, or examined through them. Here we intro...

Jin-Yu Wu, Wan-Zhe Xu, Yi-Zhou Zhuang et al. · bioRxiv · 0 citations

Open access Aug 2026

Bioinformatics analysis of regulatory relationships between long non-coding RNA genes and transcription factor coding genes

This study systematically analyze the proximity and co-expression patterns of lncRNAs and TF-encoding genes in humans using genome-wide annotations and transcriptomic data to reveal consistent spatial associations and tissue-specific co-expression between lncRNAs and TFs.

T. Yamada, Martin Loza, I. Hatada et al. · Scientific Reports · 0 citations