esm2-layer-invariance: depth matters but the final layer suffices - leakage-free evaluation of layer choice in protein language models (BIOINF-2026-2348 second revision)
Code and per-dataset results for the second revision of manuscript BIOINF-2026-2348 (Bioinformatics). This version adds: (1) the unified-protocol pooling contrast between the random and leakage-free splits with per-dataset paired bootstrap statistics; (2) published ProteinGym v1.3 anchors recomputed per assay on the sa...