Skip to content
Open access

Benchmarking DFT for Chain-Length and Water Effects in Thermal Conia–Ene Cyclization

Aug 2026 · ACS Omega · Vol 11, pp. 51623 - 51634 · 0 citations · 101 references
Medicine

Abstract

Reliable density functional theory (DFT) methods for thermally driven cyclization reactions remain insufficiently established, particularly for systems in which proton transfer, conformational preorganization, and weak environmental effects jointly shape the energy landscape. Here, we present a systematic benchmark of DFT exchange–correlation functional/basis-set combinations against CCSD(T) reference energies for the thermal Conia–Ene cyclization, using chain length and explicit water assistance as chemically relevant probes of functional performance. Representative reaction profiles were constructed for two model substrates (hex-5-ynal and hept-6-ynal), considering pathways with and without explicit water, in both gas phase and implicit solvent. The reaction proceeds stepwise through enolization followed by cyclization, with enolization defining the intrinsic kinetic bottleneck in the water-free pathway (ca. 70 kcal mol–1). Explicit water selectively lowers this barrier by up to 30 kcal mol–1 through proton-transfer mediation, whereas the cyclization barrier is primarily controlled by chain length through transition-state preorganization; implicit solvation has only a minor energetic effect. Across 38 approximate exchange–correlation functionals and 14 basis sets, range-separated hybrids provide the most accurate and balanced description of both activation barriers and reaction energies. In particular, ωB97XD and CAM-B3LYP-D3BJ achieve near-chemical accuracy, with mean absolute errors close to 1 kcal mol–1 when combined with triple-ζ basis sets containing polarization and diffuse functions. Comparable accuracy is also achieved by the double-hybrid functionals mPW2PLYP and DSD-PBEP86, albeit at a substantially higher computational cost. Overall, this study establishes a practical CCSD(T)-referenced benchmark and identifies robust DFT protocols for modeling thermal Conia–Ene cyclizations, with expected transferability to more complex substrates and confined environments.

Read PDF

Similar papers

Jul 2026

Cooperative stability, many-body expansion, and σ-aromaticity of (LiH)n clusters (n = 1-6): A CCSD(T) study at the complete basis set limit.

We investigated the energetics and bonding of lithium hydride clusters (LiH)n (n = 1-6) using a composite ab initio scheme inspired by W2 theory to achieve sub-kcal/mol accuracy. This approach combines CCSD(T) results extrapolated to the complete basis set limit with a rigorous treatment of core-valence correlation, sc...

Emmanouil C. Semidalas, Filippos Drakopoulos, E. A. Routsi et al. · 0 citations
Aug 2026

Beyond the Isolated Halogen-Bond Dimer: Cooperative and Anticooperative Motifs in C6F4I2···HMTA.

Halogen bonding (XB) is often analyzed in terms of isolated dimers, yet under realistic solution conditions, it coexists with a dense, rapidly fluctuating network of weaker contacts whose net effect on bond strength is difficult to quantify. Here, we combine gas-phase quantum-chemical calculations with explicit-solvent...

D. V. Krutin, A. A. Titova, M. Kaplanskiy et al. · 0 citations
Open access Jul 2026

Switching Site Selectivity in Alkoxyamine Hydration: From Lone-Pair Direction to Solvent Network Dominance.

Predicting site selectivity during the earliest stages of solvation in multifunctional organic molecules remains a complex challenge in chemical physics. In this work, we use high-resolution rotational spectroscopy and quantum-chemical calculations to decode the hydration landscape of N,N-diethylacetyloxyamine (DEAcA),...

Filippo Baroncelli, L. Evangelisti, J. López et al. · 0 citations
Open access Aug 2026

Molecular-level DFT analysis of phosphoric acid binding, hydrogen-bond cooperativity, and local proton transfer in poly(vinyl alcohol)/citric acid membrane models

A systematic density functional theory study of hydrogen bonding, cooperative binding, and Grotthuss proton transfer in PVA/CA/H₃PO₄ proton exchange membranes is presented. Twenty-three calculations were performed at the B3LYP-D3BJ/6-31G* level using ORCA 6.1.1, encompassing geometry optimisation, potential energy surf...

Shahid Ali, Faiq Umar, Sikandar Azam · 0 citations
Open access Jul 2026

Solvent Stabilization of Protic Oxonium/Ammonium Intermediates in Cation Radical Cyclization Reactions Investigated via Computational Approaches

Anodic intramolecular cyclization reactions have substantial synthetic utility for formation of cyclic carbon–carbon or carbon–heteroatom bonds. For cases of intramolecular trapping of a cation radical by a protic nucleophile, the cyclization step coincides with a substantial increase in substrate acidity and thus may...

Shahriar N. Khan, John H. Hymel, Jesse G. McDaniel · 0 citations
Jul 2026

Free Energies of Solvation in Cyclohexane and Water: United-Atom vs All-Atom.

Free energies of solvation (ΔGsol) in a prototypical liquid alkane, cyclohexane, have been computed for 101 organic molecules at 25 °C. Monte Carlo statistical mechanics (MC) was used with free-energy perturbation theory (FEP) and both OPLS united-atom (UA) and all-atom (AA) force fields. Updated OPLS-UA parameters are...

W. Jorgensen, J. Tirado-Rives · 0 citations

We use cookies to run the site and, with your consent, for analytics and to show ads. See our Cookie Policy.