Oct 2026· Zenodo (CERN European Organization for Nuclear Research)· 1 references
Abstract
This software release provides supplementary computational verification for the study “Blood-based fibrosis scores align with liver stiffness measured by two-dimensional shear-wave elastography in type 2 diabetes”.Version 1.6.0 contains Python code for liver-score calculations, Spearman correlations, age- and sex-adjusted partial Spearman correlations, Benjamini–Hochberg false discovery rate correction, 10,000-resample bootstrap confidence intervals, and sensitivity analyses. It also includes software requirements, documentation, input definitions, mathematical unit tests, and selected rounded aggregate results corresponding to the revised manuscript.Clinical and direct biomarker–ultrasound associations are adjusted for age and sex only. Recruitment site is not used as a covariate.No participant-level records, patient identifiers, linkage keys, individual derived scores, or private verification datasets are included. Full numerical reproduction of the observed study results requires separately authorized access to the original participant-level data. Such access is not guaranteed.This implementation supports parallel verification and does not replace the statistician’s analyses or professional judgment.The MIT license applies to the software source code and its documentation. The accompanying aggregate tables are manuscript-result summaries; no separate open-data license is asserted. See RIGHTS.md for the scope of rights and reuse.
This publication proposes a definition and a classification of agile software development approaches and analyses ten software development methods that can be characterized as being "agile" against the defined criterion.
P. Abrahamsson, O. Salo, Jussi Ronkainen et al.· arXiv.org· 727 citations· ⚡54
The study shows that agile practices improve both informal and formal communication, but indicates that, in larger development situations involving multiple external stakeholders, a mismatch of adequate communication mechanisms can sometimes even hinder the communication.
M. Pikkarainen, Jukka Haikara, O. Salo et al.· Empirical Software Engineeri...· 401 citations· ⚡48
The results indicate that software engineering work practices are chosen opportunistically, adapted and configured to provide value under the constrains imposed by the startup context.
Nicolò Paternoster, Carmine Giardino, M. Unterkalmsteiner et al.· Information and Software Tec...· 394 citations· ⚡54
The results show that the embedded industry has been able to apply agile methods in its development processes and that the appreciation of the agile methods and their individual practices appears to increase once adopted and applied in practice.
O. Salo, P. Abrahamsson· IET Software· 238 citations· ⚡9
Consequences of happiness and unhappiness that are beneficial and detrimental for developers' mental well-being, the software development process, and the produced artifacts are found.
D. Graziotin, Fabian Fagerholm, Xiaofeng Wang et al.· Journal of Systems and Softw...· 236 citations· ⚡13
The Mobile-D approach is briefly outlined here and the experiences gained from four case studies are discussed, which helped develop an agile development approach for mobile application development.
P. Abrahamsson, Antti Hanhineva, H. Hulkko et al.· Conference on Object-Oriente...· 225 citations· ⚡18
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