Skip to content
#software testing Open access

PostopAKI Transport: three-database analysis code and aggregate results for creatinine-defined learning targets and local adaptation

Oct 2026 · Zenodo (CERN European Organization for Nuclear Research)
Acute Kidney Injury Research

Abstract

This release contains analysis code and aggregate results supporting the manuscript “Creatinine-defined learning targets and local adaptation of perioperative acute kidney injury prediction models”. The study uses MIMIC-IV v3.1, INSPIRE v1.4.2 and MOVER EPIC records, with evaluable cohorts of 27,735, 44,194 and 8,890 hospitalizations, respectively. It examines how creatinine-based outcome construction affects model learning and external evaluation, and how imported source scores can support local learning with limited development data. Analyses include transport and recalibration, controlled input and training-label processing, event-count and structured controls, local adaptation at two patient budgets, and fixed-capacity event coverage and priority-list turnover. Version 2.0.0 includes 71 aggregate CSV files, an aggregate processing codebook, five main figures and one supplementary figure with reproduction code, data dictionaries, tested environment information, a result-to-code map, and configurable restricted-data analysis entry points. The public aggregate workflow rebuilds the figures and main transport table without clinical records. The documentation distinguishes fresh fitting, fixed-prediction evaluation and bounded checks against historical caches. Raw clinical records, patient identifiers, patient-level features or predictions, fitted model objects, private replay manifests and credentials are not included. Clinical-data analyses require independently authorized access through the database providers. Exact historical MIMIC-IV/INSPIRE partition and tied-value replay additionally depends on restricted manifests described in the archive; the public ZIP alone does not provide those inputs. A documented deterministic alternative supports a new analysis. This is a software and aggregate-results release, not a manuscript preprint or a deployable clinical prediction tool. Version 2.0.0 extends the earlier two-database release 1.0.0 (https://doi.org/10.5281/zenodo.23015065); that earlier release does not cover the present three-database analyses. Original software is licensed under the MIT License. Original documentation, figures and aggregate statistical reports are licensed under CC BY 4.0. These licenses apply to their respective components and do not alter the terms governing MIMIC-IV, INSPIRE or MOVER source data. This work was supported by the Traditional Chinese Medicine Research Project of Zhejiang Province (grant no. 2024ZL915), the Medical and Health Research Project of Zhejiang Province (grant no. 2025HY0970), and the Project of Ningbo Leading Medical & Health Discipline (discipline no. 2026-A14). The funders had no role in the study design, data analysis or interpretation, manuscript preparation, or decision to submit the manuscript.

View source

Similar papers

#computer vision Review Sep 2017

Agile Software Development Methods: Review and Analysis

This publication proposes a definition and a classification of agile software development approaches and analyses ten software development methods that can be characterized as being "agile" against the defined criterion.

P. Abrahamsson, O. Salo, Jussi Ronkainen et al. · 727 citations · ⚡54
#computer vision Jun 2008

The impact of agile practices on communication in software development

The study shows that agile practices improve both informal and formal communication, but indicates that, in larger development situations involving multiple external stakeholders, a mismatch of adequate communication mechanisms can sometimes even hinder the communication.

M. Pikkarainen, Jukka Haikara, O. Salo et al. · 401 citations · ⚡48
#machine learning Review Open access Oct 2014

Software development in startup companies: A systematic mapping study

The results indicate that software engineering work practices are chosen opportunistically, adapted and configured to provide value under the constrains imposed by the startup context.

Nicolò Paternoster, Carmine Giardino, M. Unterkalmsteiner et al. · 394 citations · ⚡54
#computer vision Review Mar 2008

Agile methods in European embedded software development organisations: a survey on the actual use and usefulness of Extreme Programming and Scrum

The results show that the embedded industry has been able to apply agile methods in its development processes and that the appreciation of the agile methods and their individual practices appears to increase once adopted and applied in practice.

O. Salo, P. Abrahamsson · 238 citations · ⚡9
#computer vision Open access Jul 2017

What happens when software developers are (un)happy

Consequences of happiness and unhappiness that are beneficial and detrimental for developers' mental well-being, the software development process, and the produced artifacts are found.

D. Graziotin, Fabian Fagerholm, Xiaofeng Wang et al. · 236 citations · ⚡13
#computer vision Open access Oct 2004

Mobile-D: an agile approach for mobile application development

The Mobile-D approach is briefly outlined here and the experiences gained from four case studies are discussed, which helped develop an agile development approach for mobile application development.

P. Abrahamsson, Antti Hanhineva, H. Hulkko et al. · 225 citations · ⚡18

Related blog posts

Microsoft Research Blog Oct 12, 2026

Simulating student learning for better AI tutoring

StudentSim is a research system for evaluating and improving AI tutoring tools before they are tested with learners. It models how individuals may engage with tutors, giving feedback to improve tutor performance across subjects like chess, writing, and mathematics. The post Simulating student learning for better AI tutoring appeared first on Microsoft Research.

MIT News · Artificial Intelligence Oct 2, 2026

Documenting the tech worker movement

Writing as a participant and researcher, PhD student JS Tan SM ’22 has co-authored a new book about the rise of tech worker protests and the employer backlash that followed.

We use cookies to run the site and, with your consent, for analytics and to show ads. See our Cookie Policy.