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#machine learning Preprint Open access

A temporal graph dissimilarity measure capturing epidemic spreading behavior

Salvatore Freni Lorenzo Dall'Amico Francesca Pistilli Alain Barrat Tatiana Tommasi Ciro Cattuto
Oct 2026
Machine Learning

Abstract

Comparing temporal networks is a challenging problem in network analysis. Commonly adopted methods compare structural properties of temporal graphs and can be highly sensitive to the pre-selected features. However, temporal networks are the support of dynamical processes, and a process may take place in statistically indistinguishable ways on structurally different temporal graphs. In particular, a dissimilarity measure that compares temporal graphs based on how spreading processes unfold on them is highly desirable. In this work, we first define the Time-Shift DTW, a dissimilarity between epidemic curves that accounts for both differences in their shape and temporal shifts. We then introduce Epidemic-Aware Temporal Graph Dissimilarity (EATGD), a deterministic and differentiable dissimilarity between temporal graphs that combines an embedding-based temporal graph distance with a set of topological and temporal features. Its parameters are calibrated using stochastic SIR simulations to maximize the correlation with the Time-Shift DTW, after which graph comparisons require no further epidemic simulations. Using empirical human proximity networks from the SocioPatterns collaboration and synthetic temporal graphs, we show that EATGD captures epidemic-based graph dissimilarity and generalizes across heterogeneous network settings. Its differentiability and computational efficiency make EATGD suitable for integration into machine-learning pipelines and provide a potential loss function for training generative models to reproduce epidemic dynamics without requiring an exact reconstruction of fine-grained network structure.

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