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Scaling EPS yield and bio-carrier application of Bacillus paralicheniformis UB08 for rapid lead remediation

Aug 2026 · PeerJ · 0 citations · 58 references

TL;DR

The most potent strain, Bacillus paralicheniformis UB08 (TISTR 10842), displayed an extraordinary nominal Pb tolerance, with a minimum bactericidal concentration exceeding 9,000 ppm, and alginate bead encapsulation enables rapid and complete Pb removal, offering a promising solution for heavy metal treatment based on physical adsorption and potential biological synergies.

Abstract

Heavy metal pollution from industrial operations poses severe environmental risks due to its toxicity and bioaccumulation. Conventional chemical and physical remediation methods are costly and generate secondary toxic sludge. Therefore, this study aims to investigate the potential of extracellular polymeric substance (EPS) producing bacteria as a sustainable, eco-friendly alternative for bioremediation. EPS producing bacteria were isolated from chemical factory effluent sludge and screened on modified Winogradsky’s medium. The isolates were identified by 16S rRNA gene sequencing and phylogenetic analysis. Heavy metal tolerance to lead (Pb), cadmium (Cd), and mercury (Hg) was evaluated in tryptic soy broth (TSB) containing up to 9,000 ppm of each metal. Culture conditions, including carbon/nitrogen sources, pH, and temperature, were optimized to maximize biomass and EPS yield. Functional groups of EPS were characterized by Fourier transform infrared (FTIR) spectroscopy. To assess bioremediation efficiency, the bacterial isolate was immobilized and encapsulated on ceramic rings, water hyacinth stems, and alginate beads. The surface morphology of the bio-carriers was visualized using field-emission scanning electron microscopy (FESEM). Pb removal efficiency (15 ppm) was quantified using flame atomic absorption spectrophotometry (FAAS). Among the isolated strains, the most potent strain, Bacillus paralicheniformis UB08 (TISTR 10842), displayed an extraordinary nominal Pb tolerance, with a minimum bactericidal concentration (MBC) exceeding 9,000 ppm. In contrast, the strain remained highly sensitive to Cd and Hg with MBC of seven ppm and four ppm, respectively. Optimization in modified TSB (MTSB), containing 0.6% sucrose and 4% yeast extract at pH 6.0 and 55 °C, enhanced EPS production 5.5-fold to 0.4524 ± 0.0176 g/100 ml compared with 0.0821 ± 0.0076 g/100 ml in standard TSB. EPS was characterized as a glycoprotein containing 35.92% glucose and 60.08% fructose equivalents (quantified relative to their respective standards) and 1.35% protein, with a polysaccharide backbone enriched with hydroxyl and amine functional groups. FESEM imaging verified successful biofilm formation and cell immobilization on all matrices. In bioremediation tests, free cells achieved 33.9% of Pb removal. Notably, alginate bead-encapsulated UB08 achieved 100% Pb removal within 2 days, significantly better than immobilization on water hyacinth (100% at 5 days) and ceramic rings (71.51% at 7 days). B. paralicheniformis UB08 demonstrates exceptional thermotolerance and highly efficient Pb removal from solution. Alginate bead encapsulation enables rapid and complete Pb removal, offering a promising solution for heavy metal treatment based on physical adsorption and potential biological synergies.

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Open access Jul 2026

Ureolytic Lysinibacillus sp. exhibiting Calcium Carbonate Precipitation with Effective Lead (Pb) Removal

Industrial effluents contaminated with heavy metals are a major environmental issue, prompting the need for sustainable bioremediation methods. Microbially induced calcium carbonate precipitation (MICP) is a remediation method that offers a long-term solution for enhancing soil mechanical properties, as well as reducing pollution from heavy metals. The objectives of the current study include screening and identifying native ureolytic bacteria from soil in Karad, as well as assessing calcite precipitation by ureolytic metallotolerant bacteria. The effectiveness of the isolated bacteria in removing lead as a heavy metal was tested in the medium. This research focuses on the removal of Pb heavy metal by using the MICP method. Samples of wastewater were taken from calcareous soils and effluents contaminated with heavy metals. Ureolytic bacteria were identified using urea agar medium and nine positive isolates were obtained by using Christensen’s media. Ureolytic isolates were then screened for their tolerance to metal Pb²⁺ as well as calcium precipitation. The maximum tolerance ranged from 2 mM to 8 mM, depending on the metal ion. The potential isolate was identified through 16S rRNA gene sequencing. Lysinibacillus fusiformis was recognized as a urease-producing, metallotolerant bacterium with calcium precipitation. By using Lysinibacillus fusiformis, 86.04 % of the lead was removed. This is to evaluate Lysinibacillus-mediated MICP for Pb bioremediation from under environmentally relevant conditions, treated for real wastewater applications.

Yashashree Jadhav, Girish R. Pathade, G. Mali · 0 citations
Open access Jul 2026

Kinetic study of glyphosate biodegradation by actinobacterial consortium RH1: implications for bioremediation

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Hadjer Rebai, Rym Salah-Tazdaït, Djaber Tazdaït et al. · 0 citations
Aug 2026

Valorization of different agricultural wastes for yeast based Reactive Black 5 bioaccumulation.

The textile industry generates large volumes of dye-laden effluents that pose risks to aquatic ecosystems and human health. This study evaluates the bioaccumulation of Reactive Black 5 (RB5) using Candida boidinii and Kluyveromyces marxianus yeast strains. Key operational parameters including initial pH, incubation time, dye concentration, and microbial growth were systematically investigated. In addition, the effects of low-cost agricultural wastes-carrot pomace (CP), industrial tea waste (ITW), and pumpkin pomace (PP)-as supplementary substrates were compared. Results showed that CP was the most effective substrate, with 100 g/L CP significantly enhancing RB5 removal. At pH 5.0 and 50 mg/L RB5, removal efficiencies reached 96.88% for C. boidinii and 81.76% for K. marxianus with CP, compared to 72.90% and 65.07% with PP. Although removal efficiency decreased at higher dye concentrations, the maximum dye uptake capacity (qm) increased with initial RB5 concentration, reaching 52.52 mg/g for C. boidinii and 33.23 mg/g for K. marxianus over the tested range (≈50-600 mg/L). To our knowledge, this is the first report demonstrating RB5 removal by these yeasts using CP as a low-cost substrate. Overall, CP significantly improves yeast-based RB5 bioaccumulation and represents a promising, sustainable option for treating dye-contaminated wastewater.

Eda Açıkel, Aybüke Kut Yılmaz, Sevgi Ertuğrul Karatay · 0 citations
Jul 2026

Characterization of Biosurfactants Produced by a Novel Hydrocarbonoclastic Bacterial Strain Rhodococcus ruber N19 Isolated From River Sediment

Biosurfactants are eco‐friendly, surface‐active compounds produced by microorganisms that have significant industrial and environmental applications due to their biodegradability and low toxicity. This study focuses on the production and characterization of biosurfactants by bacterial strain N19, a novel hydrocarbonoclastic bacterium isolated from Soummam River sediment. The bacterium was cultured in mineral salt medium supplemented with crude oil to stimulate biosurfactant production. Surface tension reduction (23.14 ± 0.12 mN/m), emulsification index (72.13% ± 1.15%), and oil displacement (4.2 ± 0.75 cm) tests confirmed the presence of an effective biosurfactant. Further phenotypic and molecular identification methods, including 16S rRNA sequencing, established the strain's identity as Rhodococcus ruber N19. This strain produced 7.92 ± 0.02 mg/mL biosurfactant. Structural characterization using thin layer chromatography (TLC), Fourier‐transform infrared (FTIR) spectroscopy, matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry (MALDI‐TOF/MS), and liquid chromatography–tandem mass spectrometry (LC–MS/MS), and nuclear magnetic resonance (NMR) analyses revealed that the biosurfactant produced by this strain is a lipopeptide. The nonhemolytic properties, combined with the ability to lower surface tension and exhibit strong emulsification and oil displacement activities, highlight the potential of this biosurfactant for bioremediation, petroleum industry applications, and biomedical use.

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